A Collaborative Electronic Laboratory Notebook for Open, Shared and Reproducible Data-Driven Science​
TWCF Number
0486
Project Duration
September 1 / 2020
- August 30 / 2022
Core Funding Area
Other Charitable Purposes
Region
North America
Amount Awarded
$766,000

* A Grant DOI (digital object identifier) is a unique, open, global, persistent and machine-actionable identifier for a grant.

Director
Daniel Marcus
Institution Radiologics, Inc.

With a grant from Templeton World Charity Foundation, a collaborative team—Daniel Marcus, Lucia Melloni, and Sean Hill—is developing a cost-free laboratory notebook that allows neuroscientists to share experimental data.

They will also build a comprehensive open science platform that captures a broader range of experimental data, produces a semantic representation of the data, and provides users with tools to search for and access the semantically enabled data.

The platform will build on several key components. The e-notebook includes a user-friendly, app-based interface to define the structure and content of experiments, including fMRI, EEG, MEG, and ECOG methods. The database will use the XNAT informatics system developed by Dr. Marcus's laboratory and Radiologics. The data discovery component will build on the Blue Brain Nexus platform developed by Dr. Hill's team.

XNAT and Nexus are popular open source applications that have advanced reproducible science. In this project, the team will integrate these applications through a set of open APIs and data structures. They will also create a new user-focused web-based data discovery service. This service will enable scientists to aggregate, compare, and reanalyze data in a scientifically rigorous manner. The platform will provide a sweeping new set of functions that promote and enable reproducible neuroscience, shaping the next generation of scientific publishing.​

Disclaimer
Opinions expressed on this page, or any media linked to it, do not necessarily reflect the views of Templeton World Charity Foundation, Inc. Templeton World Charity Foundation, Inc. does not control the content of external links.
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